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Steitz Center for Structural Biology
Introduce
Greetings
Objectives
Organization
Research
Members
Professor
Ph.D student
M.S.-Ph.D integrated
M.S. student
Researcher
Publication
Activity
Seminar
Workshop
Community
News
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Journal
Acta Crystallographica Section D
Achives of Biochemistry and Biophysics
ASBMB online journals (JBC, TiBS)
ASM online journals (J. Bact., etc.)
BBA-Protein structure & Molecular enzymology
Biochemical and Biophysical Research Comm
Biochemical Journal
Biochemistry
Biolphysical Journal
Biotechnology & Bioengineering
Cell
Current Opinion
Current Biology
EMBO Journal
European Journal of Biochemistry
FASEB Journal
FEBS LETTERS
Journal of Cell Biology
Journal of Bacteriology
Journal of Biochemistry
Journal of Biological Chemistry
Journal of Molecular Biology
Journal of Neuroscience
Journal of Structural Biology
Molecular & Cellular Biology
Molecular Biology of the Cell
Molecular Cell
Nature
Nature Biotechnology
Nature Genetics
Nature Structural & Molecular Biology
Neuron
Neuroscience
Nucleic Acid Research
PNAS
Protein Engineering Design and Selection
Protein Expression and Purification
Protein Science
Proteins: Structure, Function, and Genetics
Science
Structure
Trends
Databases
BMCD
EcoCyc (E. coli database)
EXPASY
HIC-UP
NCBI - Blast
NCBI GenBank
PredictProtein Server (Input_ID)
Protein Data Bank
TIGR
Structure Information & Analysis Servers
CATH (Hierarchical Classification of Protein Domail Structures)
CCA+ (CD spectrum analyser program)
CD pro (CD spectrum analyser program)
CE (Combinational Extension)
Crystal twinning server
DALI
Dichroweb (CD spectrum analyser program)
DrawCoil 1.0 (helical wheel diagram)
ERRAT
HIT (Helix Interaction Tool)
K2D (CD spectrum analyser program)
LZ prediction site (Leucine Zipper prediction server)
PDBsum (Protein Secondary Topology Diagram)
Phyre (Protein analysis program)
PQS (Protein Quaternary Structure) Query Server
PredictProtein (Protein analysis program_Input_ID)
PROCAT (DB of 3D Enzyme Active Sites)
Protein Model Assessment Server (Molprobity)
Protein-Protein Interaction Server
Protein Secondary Structure
REFOLD (Refolding protocol)
Restriction Enzyme Site Analysis
RHYTHM (Prediction of Helix-Helix contacts)
SCOP (Structural Classification of Proteins)
Secondary Structure Superposition
SER (surface enthropy reduction)
Similar 3D structures
Structure Based Sequence Alignment
The Institute of Enzymolgy
TOPDOM
Verify3D (3D-1D plot)
Crystallography Softwares
ARP and wARP
AutoDock
Automated structure solution (for MIR and MAD)
BOBSCRIPT manual
CCP4 Suite
CNS
DINO : Visualizing Structural Biology
DOCK
GRASP
HKL package
MAID (ed fitting)
MODELLER
Molray
MOLMOL
MOLSCRIPT v2.0
O (Alwyn Jones homepage)
O (Morten Kjeldgaard)
Periodic Tables (scattering factor)
Phaser
PREPI v0.9 (alpha release)
PROCHECK
PyMOL
RasMol
Raster 3D
RIBBONS
Scripps Xtal View
SHARP/autoSHARP
SHELX
SINCRIS (Software database for crystallography)
SOLVE/RESOLVE
Twinning Detection
Uppsala Software Factory (USF)
X-PLOR
Synchrotron Facilities
Advanced Light Source (ALS)
Advanced Photon Source (APS)
Australian Synchrotron
Beijing Synchrotron Radiation Facility (BSRF)
Deutsches Elektronen-Synchrotron (DESY)
European Synchrotron Radiation Facility (ESRF)
National Synchrotron Light Source (NSLS)
PF (Protein Crystallography)
Photon Factory (PF)
Pohang Accelerator Laboratory (PAL)
Shanghai Synchrotron Radiation Facility (SSRF)
Spring-8
Stanford Synchrotron Radiation Lighsource (SSRL)
Taiwan Photon Source (TPS)
Crystallography related Companies
Area Detector Systems Corporation (ADSC)
Hampton Research
Molecular Structure Corporation
Oxford Cryosystems
Rigaku & Emerald Bio
Molecular Biology related Companies
Agilent Technologies
Amersham-Pharmacia Biotech
Amersham-Pharmacia Biotech (Korea)
ATCC
ChemNavigator (>2,000,000 compounds)
Life Technologies
Merck
Millipore
New England Biolab
Novagen / pET System Manual
Promega
Qiagen
RND
Roche
Sigma-Aldrich and Fluka
Sigma-Aldrich Korea
Takara Korea
Bioinformatics for Structural Biology
Coils (Coiled-coil prediction)
ExPASy tools
GlobPlot
NCBI-Conserved Domain
NCBI GenBank (DNA sequence information)
NCBI-PDB blast
NPSA (consensus secondary structure prediction)
PeptideCutter (Protease site prediction)
PPCpred (Protein construct design)
PredictProtein (Secondary structure prediction_Input_ID)
ProtParam (Physico-chemical parameters of a protein sequence)
Protein multiple sequence alignment (Identity & homology check)
ProtScale (Hydrophobicity)
SignalP (signal peptide prediction)
TMpred (Prediction of transmembrane regions)
UniprotKB : Protein information search
Webcutter (DNA restrictive enzyme site)
ETC.
BRIC
KOSEN21
Pubmed
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